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CAZyme Gene Cluster: MGYG000002471_1|CGC1

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CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002471_00046
Tail-specific protease
TC 36367 38439 + 9.B.174.1.2
MGYG000002471_00047
Protease HtpX
TC 38765 39646 + 9.B.1.1.6
MGYG000002471_00048
Riboflavin transporter RibZ
TC 39723 41090 - 2.A.1.3.17
MGYG000002471_00049
Oligogalacturonate lyase
CAZyme 41377 42543 + PL22| PL22_1
MGYG000002471_00050
Pectin degradation repressor protein KdgR
TF 42730 43521 + TrmB
MGYG000002471_00051
N-acetylmuramoyl-L-alanine amidase AmiD
null 43916 44776 + Amidase_2| PG_binding_1
MGYG000002471_00052
L-cystine uptake protein TcyP
TC 44961 46352 - 2.A.23.1.8
MGYG000002471_00053
Inner membrane protein YdjM
null 46570 47118 - YdjM
MGYG000002471_00054
Oligogalacturonate-specific porin KdgM
TC 47407 48105 - 1.B.35.1.1
MGYG000002471_00055
Putative ABC transporter substrate-binding protein YesO
TC 48418 49707 - 3.A.1.1.11
MGYG000002471_00056
Trehalose import ATP-binding protein SugC
TC 49723 50850 - 3.A.1.1.11
MGYG000002471_00057
L-arabinose transport system permease protein AraQ
TC 50864 51784 - 3.A.1.1.11
MGYG000002471_00058
Lactose transport system permease protein LacF
TC 51777 52667 - 3.A.1.1.11
MGYG000002471_00059
Pectate disaccharide-lyase
CAZyme 52708 54375 - PL2_2| PL2
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is pectin

Protein ID eCAMI subfam CAZyme substrate
MGYG000002471_00049 PL22_e0|4.2.2.6 pectin
MGYG000002471_00059 PL2_e0|4.2.2.9 pectin

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location